Simulating Large-Scale, Rhythmic Data • simphony

simphony simulates large-scale, rhythmic data, including transcriptome data and behavioral activity data. For technical details on how we designed and validated simphony, check out the paper and the accompanying results.

Installation

Option 1: CRAN

install.packages('simphony')

Option 2: Hughey Lab Drat Repository

Install BiocManager.

if (!requireNamespace('BiocManager', quietly = TRUE))
  install.packages('BiocManager')

If you use RStudio, go to Tools → Global Options… → Packages → Add… (under Secondary repositories), then enter:
- Name: hugheylab
- Url: https://hugheylab.github.io/drat/
You only have to do this once. Then you can install or update the package by entering:
```
BiocManager::install('simphony')
```
Alternatively, you can install or update the package by entering:
```
BiocManager::install('simphony', site_repository = 'https://hugheylab.github.io/drat/')
```

Usage

For an introduction to the package, read the introductory vignette. To explore more of simphony’s capabilities, check out the example vignette. For more details, check out the reference documentation.